Anna Papadopoulou
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"Theories, like islands, are often reached by stepping stones"

MacArthur & Wilson (1967)

Peer-reviewed scientific publications (SCI)
[see also my publications on Google Scholar and Research Gate]


37. Fujisawa, T, Noguerales, V, Meramveliotakis, M, Papadopoulou, A, Vogler AP (2023). Image-based taxonomic classification of bulk insect biodiversity samples using deep learning and domain adaptation. Systematic Entomology doi.org/10.1111/syen.12583

36. Overcast, I, Achaz, G, Aguilée, R, Andújar, C, Arribas, P, Creedy, TJ, Economo, EP, Etienne, RS, Gillespie, R, Jacquet, C, Jay, F, Kennedy, S, Krehenwinkel, H, Lambert, A, Meramveliotakis, E, Noguerales, V, Perez-Lamarque, B, Roderick, G, Rogers, H, Ruffley, M, Sanmartin, I, Vogler, AP, Papadopoulou, A, Emerson, BC & Morlon H (2023). Toward a Genetic Theory of Island Biogeography: Inferring Processes from Multi-Dimensional Community-Scale Data. Global Ecology and Biogeography, 32: 4-23

35. Emerson, BC, Borges, PAV, Cardoso, P, Convey, P, deWaard, JR, Economo, EP, Gillespie, R, Kennedy, S, Krehenwinkel, H, Meier, R, Roderick, G, Strasberg, D, Thebaud, C, Traveset, A, Creedy, TJ, Meramveliotakis, E, Noguerales, V, Overcast, I, Morlon, H, Papadopoulou, A, Vogler, AP, Arribas A & Andújar, C (2022). Collective and harmonised high throughput barcoding of insular arthropod biodiversity: toward a Genomic Observatories network for islands. Molecular Ecology, doi.org/10.1111/mec.16683


​34. Sampaio, FL, Day, JL, Wickramasinghe, LJM, Cyriac, VP, Papadopoulou, A, Brace, S, Rajendran, A, Simon-Nutbrown, C, Flouris, T, Kapli, P, Vidanapathirana, DR, Kotharambath, R, Ullasa Kodandaramaiah, U & Gower, DJ (2022). A near-complete species-level phylogeny of uropeltid snakes harnessing historical museum collections as a DNA source. Molecular Phylogenetics and Evolution doi.org/10.1016/j.ympev.2022.107651

33. Arribas, P, Andújar, C, Bohmann, K, deWaard, JR, Economo, EP, Elbrecht, V, Geisen, S, Goberna, M, Krehenwinkel, H, Novotny, V, Zinger, L, Creedy, TJ, Meramveliotakis, E, Noguerales, V, Overcast, I, Morlon, H, Papadopoulou, A, Vogler, AP & Emerson BC (2022). Toward global integration of biodiversity big data: a harmonised metabarcode data generation module for terrestrial arthropods. Gigascience doi.org/10.1093/gigascience/giac065

32. Noguerales V, Meramveliotakis E, Castro-Insua A, Andujar C, Arribas P, Creedy TJ, Overcast I, Morlon H, Emerson BC, Vogler AP, Papadopoulou A (2022). Community metabarcoding reveals the relative role of environmental filtering and spatial processes in metacommunity dynamics of soil arthropods across a mosaic of montane forests. Molecular Ecology doi.org/10.1111/mec.16275


31. Creedy, TJ, Andujar, C, Meramveliotakis, E, Noguerales, V, Overcast, I, Papadopoulou, A, Morlon, H, Vogler, AP, Emerson, BC, Arribas, P (2022). Coming of age for COI metabarcoding of whole organism community DNA: towards bioinformatic harmonisation. Molecular Ecology Resources 22: 847-861

30. Nabozhenko, MV, Chigray, IA, Ntatsopoulos, K, & Papadopoulou, A (2022). A key to Russian and Eastern European species of Blaps Fabricius, 1775 (Coleoptera: Tenebrionidae: Blaptinae) with the description of a new species from the North Caucasus supported by morphological and molecular data. Zootaxa 5116: 267-291

29. Arribas P, Andújar C, Bidartondo MI, Bohmann K, Coissac É, Creer S, deWaard JR, Elbrecht V, Ficetola GF, Goberna M, Kennedy S., Krehenwinkel H, Leese F, Novotny V, Ronquist F, Yu DW, Zinger L, Creeedy TJ, Meramveliotakis E, Noguerales V, Overcast I, Morlon H, Vogler AP, Papadopoulou A, Emerson BC (2021). Connecting high‐throughput biodiversity inventories: Opportunities for a site‐based genomic framework for global integration and synthesis. Molecular Ecology 30:1120-1135

28. Nabozhenko, MV, Ntatsopoulos, K, Gagarina, LV, Chigray, IA, Lagou, LJ, Papadopoulou, A (2021). Helops glabriventris glabriventris (Coleoptera: Tenebrionidae), one of the primary consumers of corticolous lichens in the coniferous forests of Cyprus: bionomics, trophic associations and description of larvae. Annales Zoologici 71: 767-778

27. Tonzo, V, Papadopoulou, A, Ortego, J (2020) Genomic footprints of an old affair: Single nucleotide polymorphism data reveal historical hybridization and the subsequent evolution of reproductive barriers in two recently diverged grasshoppers with partly overlapping distributions. Molecular Ecology 29: 2254-2268
 
26. Trichas, A, Smirli, M, Papadopoulou, A, Anastasiou, I, Keskin, B, Poulakakis, N (2020) Dispersal versus vicariance in the Aegean: combining molecular and morphological phylogenies of eastern Mediterranean Dendarus(Coleoptera: Tenebrionidae) sheds new light on the phylogeography of the Aegean area. Zoological Journal of the Linnean Society 190: 824-843


25. Tonzo, V, Papadopoulou, A, Ortego, J (2019). Genomic data reveal deep genetic structure but no support for current taxonomic designation in a grasshopper species complex. Molecular ecology, 28: 3869-3886

24. Múrria, C, Dolédec, S, Papadopoulou, A, Vogler, AP and Bonada, N (2018) Ecological constraints from incumbent clades drive trait evolution across the tree-of-life of freshwater macroinvertebrates. Ecography 41: 1049-1063

23. Papadopoulou, A, Knowles LL (2017). Linking micro- and macroevolutionary perspectives to evaluate the role of Quaternary sea-level oscillations in island diversification. Evolution 71: 2901–2917

22. Patiño, J, Whittaker, R J, Borges, P AV, Fernández-Palacios, J M, Ah-Peng, C, Araújo, M B, Ávila, S P, Cardoso, P, Cornuault, J, de Boer, E J, de Nascimento, L, Gil, A, González-Castro, A, Gruner, D S, Heleno, R, Hortal, J, Illera, J C, Kaiser-Bunbury, C N, Matthews, T J, Papadopoulou, A, Pettorelli, N, Price, J P, Santos, A M C, Steinbauer, M J, Triantis, K A, Valente, L, Vargas, P, Weigelt, P and Emerson, B C (2017) A roadmap for island biology: 50 fundamental questions after 50 years of The Theory of Island Biogeography. Journal of Biogeography doi:101111/jbi12986

21. Papadopoulou, A, Knowles LL (2016). Toward a paradigm shift in comparative phylogeography driven by trait-based hypotheses. Proceedings of the National Academy of Sciences of the United States of America 113: 8018-24 [pdf]

20. Dawson, MN, Axmacher, JC, Beierkuhnlein, C, Blois, JL, Bradley, BA, Cord, AF, Dengler, J, He, KS, Heaney, LR, Jansson, R, Mahecha, MD, Myers, C, Nogués-Bravo, D, Papadopoulou, A, Reu, B, Rodríguez-Sánchez, F, Steinbauer, MJ, Stigall, A, Tuanmu, M-N, Gavin DG (2016). A Second Horizon Scan of Biogeography: Golden Ages, Midas Touches, and the Red Queen. Frontiers of Biogeography 8(4)

19. Wachter, G*, Papadopoulou, A*, Muster, C, Arthofer, W, Knowles, LL, Steiner, F, Schlick-Steiner, B (2016). Glacial refugia, recolonisation patterns, and diversification forces in Alpine-endemic Megabunus harvestmen. Molecular Ecology 25: 2904-19 *authors contributed equally

18. Gómez-Zurita, J, Cardoso, A, Coronado, I, De la Cadena, G, Jurado-Rivera JA, Maes, J-M, Montelongo, T, Nguyen, DT, Papadopoulou, A (2016). High-throughput biodiversity analysis: Rapid assessment of species richness and ecological interactions of Chrysomelidae (Coleoptera) in the tropics. Zookeys 597: 3-26

17. De la Cadena, G, Papadopoulou, A, Maes, JM, Gómez‐Zurita, J (2017). Evaluation of bias on the assessment of diet breadth of herbivorous insects using molecular methods. Insect science
24:194-209

16. Papadopoulou, A, Knowles LL (2015). Species-specific responses to island connectivity cycles: refined models for testing phylogeographic concordance across a Mediterranean Pleistocene Aggregate Island complex. Molecular Ecology 24: 4252-4268 [pdf]
 
15. Papadopoulou, A, Taberlet, P, Zinger, L (2015). Metagenome skimming for phylogenetic community ecology: a new era in biodiversity research. Molecular Ecology 24: 3515-3517 [pdf]
 
14. Papadopoulou, A, Knowles LL (2015). Genomic tests of the species-pump hypothesis: recent island connectivity cycles drive population divergence but not speciation in Caribbean crickets across the Virgin Islands. Evolution 69: 1501–1517 
[pdf]
 
13. Papadopoulou, A, Chesters, D, Coronado, I, De la Cadena, G, Cardoso, A, Reyes, JC, Maes, J-M, Ricardo M. Rueda, RM, Gómez-Zurita J (2015). Automated DNA-based plant identification for large-scale biodiversity assessment. Molecular Ecology Resources 15: 136-152 [pdf]
 
12. Wilkinson, M, Presswell, B, Sherratt, E, Papadopoulou, A, Gower, DJ (2014). A new species of striped Ichthyophis Fitzinger, 1826 (Amphibia: Gymnophiona: Ichthyophiidae) from Myanmar. Zootaxa 3785: 045-058
 
11. Papadopoulou, A, Cardoso, A, Gómez-Zurita, J (2013). Diversity and diversification of Eumolpinae (Coleoptera: Chrysomelidae) in New Caledonia. Zoological Journal of the Linnean Society 168: 473-495 [pdf]
 
10. Papadopoulou A, Anastasiou I, Spagopoulou F, Stalimerou M, Terzopoulou S, Legakis A, Vogler AP (2011). Testing the species-genetic diversity correlation in the Aegean archipelago: toward a haplotype-based macroecology? American Naturalist 178: 241-255 [pdf]
 
9. Gower, DJ, Papadopoulou, A, Doherty-Bone, TM, Pupin, F, San Mauro, D, Loader, SP & Wilkinson, M (2011). The systematics of Boulengerula fischeri (Amphibia: Gymnophiona: Caeciliidae) based on morphological and molecular data. Zootaxa 2767: 14-24
 
8. Papadopoulou, A, Anastasiou, I, Vogler, AP (2010). Revisiting the insect mitochondrial molecular clock: the mid-Aegean trench calibration. Molecular Biology & Evolution 27: 1659-1672 [pdf]
 
7. Papadopoulou, A, Jones, AG, Hammond PM, Vogler, AP (2009). DNA taxonomy and phylogeography of beetles of the Falkland Islands (Islas Malvinas). Molecular Phylogenetics & Evolution 53: 935 – 947 [pdf]
 
6. Papadopoulou, A, Monaghan, MT, Barraclough, TG, Vogler, AP (2009). Sampling Error Does Not Invalidate the Yule-Coalescent Model for Species Delimitation. A Response to Lohse. Systematic Biology 58: 442 – 444 [pdf]
 
5. Papadopoulou, A, Anastasiou, I, Keskin, B, Vogler, AP (2009). Comparative phylogeography of tenebrionid beetles in the Aegean archipelago: the effect of dispersal ability and habitat preference. Molecular Ecology 18: 2503 – 2517 [pdf]
 
4. Papadopoulou, A, Bergsten, J, Fujisawa, T, Monaghan, MT, Barraclough, TG, Vogler, AP (2008). Speciation and DNA barcodes: testing the effects of dispersal on the formation of discrete sequence clusters. Philos Trans R Soc Lond B Biol Sci 363: 2987 – 2996 [pdf]
 
3. Hunt, T, Bergsten, J, Levkanicova, Z, Papadopoulou, A, John, OS, Wild, R, Hammond, PM, Ahrens, D, Balke, M, Caterino, MS, Gomez-Zurita, J, Ribera, I, Barraclough, TG, Bocakova, M, Bocak, L, Vogler, AP (2007). A comprehensive phylogeny of beetles reveals the evolutionary origins of a superradiation. Science 318: 1913 – 1916
 
2. Hughes, J, Longhorn, SJ, Papadopoulou, A, Theodorides, K, de Riva, A, Mejia-Chang, M, Foster, PG, Vogler, AP (2006). Dense taxonomic EST sampling and its applications for molecular systematics of the Coleoptera (beetles). Molecular Biology & Evolution 23: 268 – 278

1. Longhorn, SJ, Foster, P, Theodorides, K, Papadopoulou, A, Vogler, A (2004). Building trees from ESTs: what can ribosomal proteins tell us about metazoan phylogenies? Cladistics 20: 599-600
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